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INDEXED
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SequenceFile
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IGVFFI4829SMQO
IGVFFI4829SMQO
released
validated
Json view
File Set
IGVFDS1628VOEK
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4332
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4332_R1
md5sum
8657fe35a414b5b44eaac08623acf7d4
Content MD5sum
1b8bd50d37b172f782fc860debf99447
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-551_L1_SS-PKR-177_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4332
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
44416842
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4166RBAA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1502HDUX
yaml
seqspec
seqspec of IGVFFI4829SMQO, IGVFFI0431LWEP, IGVFFI1790VUFO
Jason Buenrostro, Broad
1.3 KB
validated