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IGVFFI4820UTCR

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0861MZYT(prime editing Variant-EFFECTS sorted on the expression of PPIF)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSitePool-THP1-PE2_Exp6_NegControl-PCRrep2_I2
md5sum
2bb4cc29a2b26e3152a29e1346208dba
Content MD5sum
d40efad2b0567af2d72ecef9df3ca4ef
File Size
10 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_pool-Amp_PPIF_5splicesite-BioRep1-FFrep1-BinNeg-PCRrep2_S997_I2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Illumina Read Type
I2
Index
TTGAATAG:AGGTGCGT
Average Read Length
8
Read Count
1496098

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
variant effects
variant effects
Jesse Engreitz, Stanford
369 B
validated

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford