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IGVFFI4810ZIYF

released
validated
File Set
IGVFDS2872HKZZ(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp15_atac_10x2_NGS1_i1
md5sum
4d58aca2ee082a2aad66fe1c5c3056a5
Content MD5sum
2d6fce8fce20e505a09555420f2fedd6
File Size
2.4 GB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/igvf15/ATAC/CMAS17_ATAC2_S4_L002_I1_001.fastq.gz
Checkfiles Version
v14
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
22NHMTLT3
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I1
Average Read Length
8
Read Count
349736395

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to liver for 18 days; Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to liver for 13 days; ... and 10 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Ansuman Satpathy, Stanford
4.4 GB
validation exempted

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1179JORS, IGVFFI8973RDXZ, IGVFFI4147AAOU, IGVFFI4810ZIYF
Ansuman Satpathy, Stanford
1.4 KB
validated