IGVFFI4806ACWJ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4343EECQ(single-nucleus ATAC-seq (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP001_G6_P051_L008_R1

md5sum

cc157acafb5cc9adef88af212a9c13ab

Content MD5sum

babb9d9b764d3b1483c63c026f79a754

File Size

2.0 GB

Submitted File Name

Multiome_ATAC_RP001_G6_L006_P051_S26_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JL2LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

68220154

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4020DOCK

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples