IGVFFI4798RALR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8073HHQK(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X035_G2_P036_L004_I2

md5sum

a4c8bb0017984d72c5b89f7d5ebde41b

Content MD5sum

c2427095bb539bef79d4d4e740acaf9c

File Size

1.3 GB

Submitted File Name

Multiome_RNA_X035_G2_L002_P036_S48_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

211938414

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0834XHYE

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) substantia nigra tissue; Homo sapiens (female, 84 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples