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IGVFFI4790CDFM

released
validated
File Set
IGVFDS5512NECU(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
20cbd329d59a3fdae2b76375e9825c3e
Content MD5sum
86e36817cbcf8abf6c15afbd6ca9883d
File Size
6.5 GB
Submitted File Name
igvf_012/nextseq/igvf_012_B02_D_next_N1_L001_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC3VTCHV
Lane
1
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
R1
Average Read Length
140
Read Count
79826836

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) heart tissue; Mus musculus NZO/H1LtJ (female, 69 days) left cerebral cortex tissue; ... and 12 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
168 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI4790CDFM, IGVFFI2932KSLX
Ali Mortazavi, UCI
1.3 KB
validated