IGVFFI4778XFLI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6363LCET(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G8_P014_L002_R1

md5sum

b98a0839777dfc310e7d6b4589420981

Content MD5sum

f398470ada62f1cea97be828add1370b

File Size

4.2 GB

Submitted File Name

Multiome_RNA_X014_G8_L008_P014_S20_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

199941966

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7957UHUR

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples