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INDEXED
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SequenceFile
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IGVFFI4776AHGG
IGVFFI4776AHGG
released
validated
Json view
File Set
IGVFDS9961QTUB
(ATAC-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-bulk-atac-chir4um-ipsc-cm-rep2-R2
md5sum
25e8b27372f996b7368086a7ab81d8a4
Content MD5sum
8b28be706a777518b6627fa132b1e195
File Size
3.2 GB
Submitted File Name
/datacommons/gersbachlab/tda17/Anglen_7276_210923B6/data/atac_seq/processed_raw_reads/Anglen_7276_210923B6/CHRIR4uM_2.R2.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
51
Read Count
99746594
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9172PRNN
InVitroSystem
GM25256 (WTC-11)
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2179LWNB
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
3.0 GB
validated
Attribution
Award
HG012053
Principal Investigator(s)
Charles Gersbach
,
Gregory Crawford
,
Tim Reddy
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke