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INDEXED
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SequenceFile
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IGVFFI4775BNNR
IGVFFI4775BNNR
released
validated
Json view
File Set
IGVFDS3643MTVJ
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
e72a46b463cc33ad82526758598e1541
Content MD5sum
111093553803d6a0e1f0117af1f33c11
File Size
6.8 GB
Submitted File Name
igvf_009/nova1/igvf_009_B14_D_nova_N1_L003_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Flowcell ID
H5VJ5DSX7
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
195371890
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5833WIAF
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5548PTNR
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9260VPZP
yaml
seqspec
seqspec of IGVFFI7482YAYV, IGVFFI4775BNNR
Ali Mortazavi, UCI
1.4 KB
validated