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INDEXED
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SequenceFile
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IGVFFI4772EXNU
IGVFFI4772EXNU
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3245PEOK
(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 341
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX21-SC4_snATAC_S0_R2
md5sum
791dc961c86b0de8cef3f0a2fa58d17e
Content MD5sum
68d76779dcb67defa45134e9bd7affe8
File Size
12 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX21-SC4/AH7T7MDSX7/XHLT1-POOL-XX21-SC4-ATAC_S12_L002_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
341
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
608751531
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9160FXRO
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 44.0 years) peripheral blood mononuclear cell; ... and 15 more samples