IGVFFI4757AZCK

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0478RINN(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G3_P072_L002_I1

md5sum

cf04f60acc8664d49a3ea2a50a888c08

Content MD5sum

0f138da33b79bfa9da7cc3e084c49bc2

File Size

1.7 GB

Submitted File Name

Multiome_RNA_X053_G3_L003_P072_S7_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

219934062

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2566PNRB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples