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INDEXED
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SequenceFile
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IGVFFI4753SCVM
IGVFFI4753SCVM
released
validated
Json view
File Set
IGVFDS9742DJVE
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8337
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8337_R2
md5sum
e19264d03d7e0ec56c98d8f03bdaaab2
Content MD5sum
0c10ee91bd585b3a82902e4f6bc76124
File Size
2.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2223_L8_SS-PKR-528_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8337
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
37105126
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6095NJDT
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 528)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5213EZJR
yaml
seqspec
seqspec of IGVFFI0194DMKY, IGVFFI4753SCVM
Jason Buenrostro, Broad
1.2 KB
validated