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IGVFFI4744IBKS

released
validated
File Set
IGVFDS5798HAUC(quantification DNA barcode sequencing for lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide)
Summary
R3 reads from sequencing run 4
File Format
fastq
Content Type
reads
md5sum
06d4ba12a557a1e79e244e6281fbf3ec
Content MD5sum
89e943210b277737f50f838cf78462fd
File Size
48 MB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/count/HEK293T/run4/293T-DNA-2_S2_R3_001.fastq.gz"
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
seqrun4
Attribution
Nadav Ahituv, UCSF

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
4
Sequencing Kit
NextSeq 500 High Output v2 Kit
Illumina Read Type
R3
Average Read Length
15
Read Count
2917104

Files Derived From This File

3 items
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
19 MB
validated
tsv
reporter experiment barcode
GRCh38 reporter experiment barcode
Nadav Ahituv, UCSF
216 MB
validated
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
18 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0745BZJW, IGVFFI3315BUYG, IGVFFI8699ZPZT, IGVFFI8821TPBU, IGVFFI8978OOBC, IGVFFI4744IBKS, IGVFFI3494FIPR, IGVFFI7895RSMK, IGVFFI3917RLFW, IGVFFI6204YNLN, IGVFFI7646DGAU, IGVFFI6913ZHZQ
Nadav Ahituv, UCSF
1.8 KB
validation exempted