IGVFFI4712GDQA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8483WUQH(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP010_G3_P058_L001_R2

md5sum

4a2f0c4cb2541303fb1d4de98d7c4502

Content MD5sum

534af47729c7c9deece42740f7f0381d

File Size

3.1 GB

Submitted File Name

Multiome_RNA_RP010_G3_L003_P058_S42_L001_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

73075693

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7086NABQ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; ... and 12 more samples