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INDEXED
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SequenceFile
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IGVFFI4704XUQF
IGVFFI4704XUQF
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7338
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7338_R1
md5sum
7b0bd7387b8dbbc718af2d2d829bc139
Content MD5sum
1dbd9951118872b3a920794a6284da45
File Size
7.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1910_L6_SS-PKR-433_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7338
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
187407186
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8153CPRN
yaml
seqspec
seqspec of IGVFFI4704XUQF, IGVFFI5683TTVW
Jason Buenrostro, Broad
1.3 KB
validated