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IGVFFI4688QTXZ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3979YUTV(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X039_G8_P041_L003_R3
md5sum
09448deafdad1f4f2da3c42f1ea86598
Content MD5sum
0ffb783ea09b5e6f9ab6758a7a678f49
File Size
2.1 GB
Submitted File Name
Multiome_ATAC_X039_G8_L008_P041_S2_L003_R3_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223JJTLT3
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R3
Average Read Length
51
Read Count
67019645

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 82 years) substantia nigra tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 84 years) cerebellar cortex tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF