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INDEXED
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SequenceFile
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IGVFFI4663QWNI
IGVFFI4663QWNI
released
validated
Json view
File Set
IGVFDS8970MJXV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4374
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4374_R1
md5sum
dffcb3e06c2d59030f41ea480234a143
Content MD5sum
6e2cb7bb102e9a496a295228a94bdab8
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-538_L2_SS-PKR-172_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4374
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
44951961
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7032AAKE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9758KWPJ
yaml
seqspec
seqspec of IGVFFI4663QWNI, IGVFFI5933VRFJ, IGVFFI8074KVNK
Jason Buenrostro, Broad
1.3 KB
validated