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INDEXED
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SequenceFile
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IGVFFI4660WBBI
IGVFFI4660WBBI
released
validated
Json view
File Set
IGVFDS4993AQUF
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
md5sum
18ed39549ccf85744a9d284685407aa0
Content MD5sum
8237a092c186b78fd27de64f4b5082f6
File Size
7.6 GB
Submitted File Name
igvf_009/nova1/igvf_009_B06_D_nova_N1_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4
Flowcell ID
H5VJ5DSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
203177006
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4177UWKS
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3777GWJF
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9360RDVN
yaml
seqspec
seqspec of IGVFFI4660WBBI, IGVFFI9131LLYX
Ali Mortazavi, UCI
1.4 KB
validated