IGVFFI4651BRMF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5614USRJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP030_G1_P078_L008_I1

md5sum

d236b17306f0fa9054e885e91c124b5f

Content MD5sum

792947f5d8ded19651974cd109d34fb5

File Size

1.2 GB

Submitted File Name

Multiome_RNA_RP030_G1_L001_P078_S73_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

154784446

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1787GSWB

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 6 more samples