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INDEXED
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SequenceFile
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IGVFFI4650CEAX
IGVFFI4650CEAX
released
validated
Json view
File Set
IGVFDS0997DPPP
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8322
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8322_R1
md5sum
0a216329768dcb2e1ce8980a57e60c83
Content MD5sum
728793859ba15f8d6a963c23cccdf5c8
File Size
3.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2176_L7_SS-PKR-574_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8322
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
75570075
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7444XSMN
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 574)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2329SMGD
yaml
seqspec
seqspec of IGVFFI4650CEAX, IGVFFI4880UJBC
Jason Buenrostro, Broad
1.3 KB
validated