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INDEXED
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SequenceFile
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IGVFFI4646ZTVQ
IGVFFI4646ZTVQ
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8912PCXM
(single-nucleus ATAC-seq (10x multiome))
Summary
I1 reads from sequencing run 183
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX14-SC1_snATAC_S0_I1
md5sum
802c79c4fa13d00f6f2a89564350f7de
Content MD5sum
c35886097e77deae8b30945266adae37
File Size
2.0 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX14-SC1/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX14-SC1-ATAC_S1_L001_I1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
183
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
8
Read Count
289256445
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4323TWYD
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 35.0 years) peripheral blood mononuclear cell; ... and 18 more samples