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INDEXED
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SequenceFile
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IGVFFI4634MHKR
IGVFFI4634MHKR
released
validated
Json view
File Set
IGVFDS2665DDUU
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
md5sum
eb5176fc213d4fedb8b7604db36ba396
Content MD5sum
27994289551b9a2f321ec39ca363c578
File Size
6.2 GB
Submitted File Name
igvf_010/nova1/igvf_010_B12_D_nova_N1_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4
Flowcell ID
H7TLWDSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
178095477
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM3766TQRT
MultiplexedSample
gastrocnemius
,
kidney
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4155ERID
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4104LFOQ
yaml
seqspec
seqspec of IGVFFI3601ZPFB, IGVFFI4634MHKR
Ali Mortazavi, UCI
1.4 KB
validated