IGVFFI4633DHWS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3944MZOB(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G6_P072_L002_R2

md5sum

d7dbe70d37a9764b5a98bcea02de05d2

Content MD5sum

cc2e96293c74765926a80d06efac0628

File Size

10.0 GB

Submitted File Name

Multiome_RNA_X053_G6_L006_P072_S10_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

147382456

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4211SBYX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples