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IGVFFI4625AZDK

released
validated
File Set
IGVFDS5682MSPJ(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 1522
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1522_R2
buenrostro-bernstein:SS-LS_1522_R2
md5sum
3a1839aaaac16adce8fd6eadc01a7bc6
Content MD5sum
b5899ceb37856351e1774934f9d840bd
File Size
2.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1115_L2_SS-PKR-5_SS-V1-2nd-THIRD_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1522
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
45484231

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Homo sapiens (female, 19 years) bone marrow cell (cellular sub pool: SS-PKR 5)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated