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INDEXED
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SequenceFile
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IGVFFI4599BEHH
IGVFFI4599BEHH
released
validated
Json view
File Set
IGVFDS9151XHFL
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 5379
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5379_R1
md5sum
17d522d4db81179bee40832b105b1717
Content MD5sum
5ab38e59f25f02949674cc67a2bdd04b
File Size
8.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1588_L5_SS-PKR-432_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5379
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
181119565
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1149LLIF
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8781PWYP
yaml
seqspec
seqspec of IGVFFI4599BEHH, IGVFFI1179JRYX
Jason Buenrostro, Broad
1.3 KB
validated