IGVFFI4563FTCV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2016YSTR(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X048_G6_P049_L001_R2

md5sum

e2a3a0a6c63426d91cc3d0f5194fc4d5

Content MD5sum

b517070ca5ceefc7a732ce40e58cb4f6

File Size

4.2 GB

Submitted File Name

Multiome_ATAC_X048_G6_L006_P049_S10_L001_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H7VW3DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

206081543

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0720FCFJ

MultiplexedSample

posterior cingulate gyrus, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 93 years) substantia nigra tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples