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INDEXED
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SequenceFile
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IGVFFI4555ESCW
IGVFFI4555ESCW
released
validated
Json view
File Set
IGVFDS0645ECAR
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 882
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_882_R1
md5sum
6408663446e9984c89a9d25167372319
Content MD5sum
536aa5e2eedb18f2f3eaa876cc87751b
File Size
597 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-895_L6_SS-PKR-171_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
882
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
10253532
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3115GZZM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7742WHEI
yaml
seqspec
seqspec of IGVFFI4555ESCW, IGVFFI5431DSVM, IGVFFI1012JMBK
Jason Buenrostro, Broad
1.4 KB
validated