Home

IGVFFI4516TPML

released
validated
File Set
IGVFDS9668QVZD(reporter library targeting histone modifications, transcription start sites genome-wide associated with autism spectrum disorder)
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
46b8012dbbb29c469a48bfbca5cdb560
Content MD5sum
eb97587a99a63b6ecef5468fae8b1809
File Size
4.5 GB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/ASD_nadav/assignment/Steph-assoc_S4_R3_001.fastq.gz"
Submitter Comment
seqrun1

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
1
Sequencing Kit
NextSeq 500 Mid Output v2 Kit
Illumina Read Type
R3
Average Read Length
146
Read Count
44633047

Files Derived From This File

2 items
tsv
barcode to element mapping
barcode to element mapping
Nadav Ahituv, UCSF
27 MB
validated
tsv
barcode to element mapping
barcode to element mapping
Nadav Ahituv, UCSF
5.6 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7550XNYO, IGVFFI3111OZMK, IGVFFI4516TPML
Nadav Ahituv, UCSF
1.4 KB
validated

Attribution

Award
HG011966
Principal Investigator(s)
Contact P.I.
Jay Shendure
Lab
Nadav Ahituv, UCSF