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INDEXED
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SequenceFile
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IGVFFI4503CYVL
IGVFFI4503CYVL
released
validated
Json view
File Set
IGVFDS1530NDJN
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8420
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8420_R1
md5sum
3e8919277185729c133ff9e7b623d1b5
Content MD5sum
f1644cb7338511460dc0ecfc2d1246e5
File Size
4.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2240_L3_SS-PKR-602_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8420
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
95726335
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9638OVAV
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 602)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4908NRNE
yaml
seqspec
seqspec of IGVFFI4503CYVL, IGVFFI6505CMQF
Jason Buenrostro, Broad
1.3 KB
validated