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IGVFFI4498HQPP

released
validated
File Set
IGVFDS9728TWXO(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 263
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2102_R1
bradley-bernstein:SS-LS_263_R1
buenrostro-bernstein:SS-LS_2102_R1
buenrostro-bernstein:SS-LS_263_R1
md5sum
b15703e4275591162d6d9496f68d75de
Content MD5sum
8dba230b312027ce64637018981cee96
File Size
208 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-184_L2_SS-PKR-132_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
263
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
7039003

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.1 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
845 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI4498HQPP, IGVFFI1728ECQN
Jason Buenrostro, Broad
1.2 KB
validated