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INDEXED
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SequenceFile
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IGVFFI4490PDCQ
IGVFFI4490PDCQ
released
validated
Json view
File Set
IGVFDS0858CFYH
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1725
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1725_R2
buenrostro-bernstein:SS-LS_1725_R2
md5sum
327feb18e3c7db9324fdde0dcc571f50
Content MD5sum
1a1ab2a3634d5cbc29ea94b48994fb26
File Size
88 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1126_L4_SS-PKR-6_SS-V1-2nd-THIRD_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1725
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
1670
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5211IRON
PrimaryCell
bone marrow
Homo sapiens (female, 19 years) bone marrow cell (cellular sub pool: SS-PKR 6)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated