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INDEXED
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SequenceFile
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IGVFFI4478WVVH
IGVFFI4478WVVH
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4227BKGR
(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 504
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX7-SC1_snATAC_S0_R2
md5sum
925f2354d6e8f269f30560361834ed86
Content MD5sum
2992f6ca39eca18dd1c933a57d81d025
File Size
3.3 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX7-SC1/AH2YMLDSX3_ICJY04/XHLT1-POOL-XX7-SC1-ATAC_S9_L004_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
504
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
195098453
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5918RYYX
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (male, 35.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 17 more samples