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SequenceFile
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IGVFFI4476LCWV
IGVFFI4476LCWV
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7435GWZK
(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 253
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX16-SC4_snATAC_S0_R2
md5sum
702c2f1f9f4ab74049d18b1144b8e6c8
Content MD5sum
9eb8aff299bcf3fe3b222d361bd3b77e
File Size
4.6 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX16-SC4/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX16-SC4-ATAC_S11_L001_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
253
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
273356820
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7234OUBC
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples