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IGVFFI4475SCUA

released
validated
File Set
IGVFDS4391GDQX(SUPERSTARR integrating a reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-rna-fastq-k562-P007-R1
md5sum
320fe2b0e9c647ad8a914e85e72616fe
Content MD5sum
2ae7f6995b2a3a2feb9bca2398e02725
File Size
14 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.rna.pool7.R1.fastq.gz
Checkfiles Version
v14
Attribution
Tim Reddy, Duke

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAFJG3FM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
116795392

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) K562 cell line transfected with a reporter library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
14 GB
validated