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INDEXED
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SequenceFile
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IGVFFI4472GWMH
IGVFFI4472GWMH
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5366
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5366_R1
md5sum
afb1ce5ea531684dfb74952def3d3844
Content MD5sum
0d83c5d44b7b958c637d43fed9ffb128
File Size
7.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1576_L2_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5366
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
166380781
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4509WYHB
yaml
seqspec
seqspec of IGVFFI4472GWMH, IGVFFI3820FJEW
Jason Buenrostro, Broad
1.3 KB
validated