Home

IGVFFI4466ZNJL

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5514ZVEH(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 6
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX1-SC1_snRNA_S0_R1
md5sum
7853fed08702e335e5d9c4609d4deb93
Content MD5sum
6350982cc10e4504f075e5b8e965db6c
File Size
3.5 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX1-SC1/AHM2T2DSX2/XHLT1-POOL-XX1-SC1-GEX_S1_L001_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
6
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
104920286

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 39.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF