IGVFFI4455OALI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4024PLUG(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G2_P052_L002_R1

md5sum

071c5a452ff50c31f14bde1a95d089aa

Content MD5sum

dc8518e6b1a77340713937e7d9bc999a

File Size

811 MB

Submitted File Name

Multiome_RNA_RP001_G2_L002_P052_S2_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

40781356

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7915KUKE

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples