{
"@context": "/terms/",
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"Item"
],
"accession": "IGVFFI4428TFDM",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP010_G6_P074_L003_I1"
],
"assay_titles": [
"10x multiome"
],
"audit": {},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping"
},
"checkfiles_version": "v20",
"content_md5sum": "a7159dbd10776610a361d55d7d1d45f1",
"content_type": "reads",
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"creation_timestamp": "2025-03-20T23:40:34.035740+00:00",
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"file_format": "fastq",
"file_set": {
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"Item"
],
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"@id": "/assay-terms/OBI_0003109/",
"term_name": "single-nucleus RNA sequencing assay"
},
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{
"@id": "/multiplexed-samples/IGVFSM2055PXMF/",
"@type": [
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"Sample",
"Item"
],
"accession": "IGVFSM2055PXMF",
"classifications": [
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],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"@type": [
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"OntologyTerm",
"Item"
],
"status": "in progress",
"summary": "mild cognitive impairment",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
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],
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"summary": "Parkinson's disease",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"@type": [
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],
"status": "in progress",
"summary": "cerebral amyloid angiopathy",
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}
],
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"sample_terms": [
{
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{
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"term_name": "substantia nigra"
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{
"@id": "/sample-terms/UBERON_0002129/",
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"term_name": "cerebellar cortex"
},
{
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},
{
"@id": "/sample-terms/UBERON_0002771/",
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"term_name": "middle temporal gyrus"
}
],
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"taxa": "Homo sapiens",
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}
],
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"illumina_read_type": "I1",
"input_file_for": [],
"integrated_in": [],
"lab": {
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"title": "Ryan Corces, Gladstone Institute UCSF"
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"md5sum": "0b9d1b9d9ac74776b5633f2f8ad78f74",
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"s3_uri": "s3://igvf-files/2025/03/20/ffdf1cbe-4ecd-488e-a6c5-3bd2246f72b1/IGVFFI4428TFDM.fastq.gz",
"schema_version": "15",
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"sequencing_kit": "NovaSeq X Series 10B Reagent Kit",
"sequencing_platform": {
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"status": "released",
"term_name": "Illumina NovaSeq X"
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"title": "Ryan Corces"
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"summary": "I1 reads from sequencing run 2",
"upload_status": "validated",
"uuid": "ffdf1cbe-4ecd-488e-a6c5-3bd2246f72b1"
}