IGVFFI4425QHKS

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2754BSGV(CRISPR prime editing Variant-EFFECTS sorted on the expression of PPIF integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSite-IndividualVariantExp-AGGT_TCAG-THP1-BioRep2-FFrep2-FACS_Input-PCRrep2_R1
md5sum
40f51d69c76146e58a97aa1851de7b35
Content MD5sum
f47a6f3e0705e2c85e2ad67a085118f8
File Size
41 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_C12-Amp_PPIF_5splicesite-BioRep2-FFrep2-BinAll-PCRrep2_S996_R1_001.fastq.gz
Checkfiles Version

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
R1
Index
CCTATGCC:AGGTGCGT
Average Read Length
151
Read Count
1956997

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution