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SequenceFile
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IGVFFI4419TXNW
IGVFFI4419TXNW
released
validated
Json view
File Set
IGVFDS7331YEQR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8588
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8588_R1
md5sum
4fe4a3d01426f70bfc855aa8fe58f6d3
Content MD5sum
05fc3df3e5e981f98eb517c17e4a76f1
File Size
678 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2322_L2_SS-PKR-184_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8588
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
14906270
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3593ZDEJ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 184)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6281QUIP
yaml
seqspec
seqspec of IGVFFI4419TXNW, IGVFFI2228DGXT, IGVFFI5272GJTN
Jason Buenrostro, Broad
1.3 KB
validated