IGVFFI4419ICZV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6183YJRV(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP001_G4_P051_L005_R2

md5sum

e246b06792993a4e6d76b4d23ac34559

Content MD5sum

4ad6012c7b137533269d6c356ffdf802

File Size

1.2 GB

Submitted File Name

Multiome_ATAC_RP001_G4_L004_P051_S24_L005_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JL2LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

72052806

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7329LEXT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples