IGVFFI4406QWXH

released
validated
File Set
IGVFDS3171OFHP(mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S2_I1
md5sum
41327222f172d97dcb6ff1ecb592f96f
Content MD5sum
2e0164c9e08230dc3fa7f33119905fa4
File Size
362 MB
Submitted File Name
/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L002_I1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Lane
2
Illumina Read Type
I1
Average Read Length
8
Read Count
49566622

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HCT116 cell line, male, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2851WWMV, IGVFFI4406QWXH, IGVFFI3618MDPB
Jesse Engreitz, Stanford
1.0 KB
validated

Attribution