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INDEXED
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SequenceFile
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IGVFFI4406DUVL
IGVFFI4406DUVL
released
validated
Json view
File Set
IGVFDS5214DFHA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8430
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8430_R1
md5sum
cc876c77c23ccbc51b2ad338fe978fc4
Content MD5sum
ff6515d2de6648888ef3f462dd9d29a1
File Size
145 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2260_L1_SS-PKR-167_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8430
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
3171585
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9269EVTL
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 167)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9708GCUD
yaml
seqspec
seqspec of IGVFFI4406DUVL, IGVFFI8352EZIM, IGVFFI1944TTFV
Jason Buenrostro, Broad
1.3 KB
validated