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INDEXED
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SequenceFile
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IGVFFI4403VVVQ
IGVFFI4403VVVQ
released
validated
Json view
File Set
IGVFDS3442XUWG
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3921
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3921_R1
md5sum
9ad0e64a8aae1003f6341bcbf8d703ec
Content MD5sum
6c59c202e16c13c57de7ae6e8335bd67
File Size
1.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-765_L5_SS-PKR-170_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3921
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
24126242
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9117YPYG
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 170)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6520EUUQ
yaml
seqspec
seqspec of IGVFFI4403VVVQ, IGVFFI2220BQEJ, IGVFFI0501SSCX
Jason Buenrostro, Broad
1.3 KB
validated