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IGVFFI4401BUJA

released
validated
File Set
IGVFDS5960BAQO(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS04-prim3-ATAC.R1.fastq.gz
md5sum
00f0591b6d55efacb351f86a08963900
Content MD5sum
ad4fb2538aeed77d70cc8af86e1c2b36
File Size
3.2 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS04-prim3-ATAC-P1_62-2.R1.fastq.gz
Checkfiles Version
v17
Submitter Comment
DSS04-prim-15k-2_P1.62,DSS04-prim-15k-3_P1.63
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
49.34
Read Count
95393350

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI4401BUJA, IGVFFI5234JFYS, IGVFFI3412XJGO
Jason Buenrostro, Broad
1.2 KB
validated