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INDEXED
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SequenceFile
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IGVFFI4393YWWL
IGVFFI4393YWWL
released
validated
Json view
File Set
IGVFDS0937CDYE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4087
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4087_R1
md5sum
4e5be7fa30e36ce6922e88d4cb78bf61
Content MD5sum
c3215574edc650f078eeda6424c60cd4
File Size
1.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-716_L3_SS-PKR-171_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4087
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
24225298
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9938KYSQ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6915OHUE
yaml
seqspec
seqspec of IGVFFI4393YWWL, IGVFFI1413SRMF, IGVFFI7702GPKE
Jason Buenrostro, Broad
1.3 KB
validated