IGVFFI4386HXIL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2462EACJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X027_G1_P026_L002_R2

md5sum

e42202ca2ce426b2a219bc2a58d1d61a

Content MD5sum

07921f5a12293d78232affdbea787179

File Size

12 GB

Submitted File Name

Multiome_RNA_X027_G1_L001_P026_S10_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV737DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

236412386

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2801FMBF

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 71 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples