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IGVFFI4386BDER

released
validated
File Set
IGVFDS3032KHHX(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 39
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2005_R2
bradley-bernstein:SS-LS_39_R2
buenrostro-bernstein:SS-LS_2005_R2
buenrostro-bernstein:SS-LS_39_R2
md5sum
8c1a5485d640e7ea3e4df4e810426c22
Content MD5sum
5026188061432a0b567343a5fcd8456a
File Size
212 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-158_L1_SS-PKR-130_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
39
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
4307852

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
3.0 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
423 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7508PACU, IGVFFI4386BDER
Jason Buenrostro, Broad
1.2 KB
validated