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INDEXED
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SequenceFile
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IGVFFI4386BDER
IGVFFI4386BDER
released
validated
Json view
File Set
IGVFDS3032KHHX
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 39
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2005_R2
bradley-bernstein:SS-LS_39_R2
buenrostro-bernstein:SS-LS_2005_R2
buenrostro-bernstein:SS-LS_39_R2
md5sum
8c1a5485d640e7ea3e4df4e810426c22
Content MD5sum
5026188061432a0b567343a5fcd8456a
File Size
212 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-158_L1_SS-PKR-130_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
39
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
4307852
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8719IQYM
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9756RDEZ
yaml
seqspec
seqspec of IGVFFI7508PACU, IGVFFI4386BDER
Jason Buenrostro, Broad
1.2 KB
validated