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IGVFFI4383OIEG

released
validated
File Set
IGVFDS5752LXFH(Proliferation CRISPR base editing screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
guillaume-lettre:BP_screen_ABE8_D14_R3_2_read2
md5sum
6b3baee8104a695f72de9456802ea3ca
Content MD5sum
02aa6eae51b08f3e4fec01110e59d5bf
File Size
1.0 GB
Submitted File Name
/home/lokensin/projects/rrg-glettre/sequencing_datastore/raw_data/BE_IGVF_20230720/samples/NS.X0070.001.IndexR1_18.D14_R3_2_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Guillaume Lettre, MHI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 SP Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
151
Read Count
18643442

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) TeloHAEC cell line modified with CRISPR base editing SpRY-ABE8e, transduced (lentivirus) with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
csv
guide quantifications
guide quantifications
Guillaume Lettre, MHI
272 KB
validated