IGVFFI4376BBOT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3628MXUK(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G1_P060_L008_R2

md5sum

5bbc1d8e48066f83999f38519213e9e9

Content MD5sum

c6d2f77c4c8778c8c7251460f448f08f

File Size

1.8 GB

Submitted File Name

Multiome_RNA_RP011_G1_L009_P060_S25_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

43112185

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4137SEKT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples